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Beth Cimini Cross posted from our GitHub wiki — check there for any future updates! Running CellProfiler from the command line has a major advantage — you don't need to spend computational power or memory creating the graphical user interface (GUI) that you're used to using in CellProfiler! It also...

Beth Cimini Everyone here at the CellProfiler team is very excited about our new 3.0 release, and we certainly hope you are too! CellProfiler 3.0 is much faster than any of our previous releases, and the addition of volumetric processing is a huge game changer. CellProfiler 3.0 looks pretty similar...

Beth Cimini For those of you who’ve been with us for a long time though, the obvious next question after how to use the new test mode is will my old CellProfiler pipelines work in the new version? We feel the same way – the pipelines you’ve accumulated over the years are precious resources! The good...