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  2. Anne Carpenter

ScienceSnippets: Building communication skills and sharing what you love

October 16, 2018

Anne Carpenter

Clearly communicating the impact of your research is one of the most important skills you need to develop as a scientist, and yet typically it is only taught by doing (and if you...

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Read More ScienceSnippets: Building communication skills and sharing what you love

Tracking projects with Gmail tags: Collaborating through email

July 09, 2018

Anne Carpenter

As the PI of the Carpenter lab (a.k.a. Broad Institute Imaging Platform, including the CellProfiler team), people often ask how I manage so many ongoing collaborations: we discuss...

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CellProfiler 3.0 release: faster, better, and 3D

October 16, 2017

Anne Carpenter

We are thrilled to announce that CellProfiler 3.0 is now released!  Download it here.

Eighteen months in the making, this is the first version of CellProfiler that can identify...

Read More CellProfiler 3.0 release: faster, better, and 3D

Quantifying microscopy images: top 10 tips for image acquisition

June 15, 2017

Anne Carpenter

Not every image you capture on your microscope is suited for quantification, no matter how nice they may look. Even though you might not notice any problems by eye, the tips outlined...

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Screening a million compounds for the price of a few thousand?

April 05, 2017

Anne Carpenter

Biologists are coming up with more and more complex physiologically-relevant assay systems and scaling them up for screens. From co-cultured cells to C. elegans to 3D organoids...

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Read More Screening a million compounds for the price of a few thousand?

Looking for the Unexpected: Unbiased Image Analysis

December 16, 2016

Anne Carpenter

So you already know how to put together an image analysis pipeline to measure particular phenotypes of interest? Great!

Have you ever considered looking for the unexpected? Say you...

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Help! Interpreting image-based profiles

November 28, 2022

Fernanda Garcia-Fossa & Anne Carpenter

In a typical quantitative microscopy experiment, biologists choose fluorescent biomarkers and measure particular features (that is “metrics”) that they...

Read More Help! Interpreting image-based profiles
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